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Publications

Genome editing–induced t(4;11) chromosomal translocations model B cell precursor acute lymphoblastic leukemias with KMT2A-AFF1 fusion

Feng Pan, Jolanda Sarno, Johan Jeong, Xin Yang, Astraea Jager, Tanja A. Gruber, Kara L. Davis, and Michael L. Cleary

The Journal of Clinical Investigation, 2024

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Dasatinib overcomes Glucocorticoid Resistance in B-cell Acute Lymphoblastic Leukemia

Jolanda Sarno, Pablo Domizi, Yuxuan Liu, Milton Merchant, Christina Bligaard Pedersen, Dorra Jedoui, Astraea Jager, Garry P. Nolan Giuseppe Gaipa, Sean C. Bendall , Felice-Alessio Bava, & Kara L. Davis

Nature Communications, 2023

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Advances in Clinical Mass Cytometry

Abhishek Koladiya, Kara L Davis

Clin Lab Med, 2023

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tidytof: a user-friendly framework for scalable and reproducible high-dimensional cytometry data analysis

Timothy J. Keyes, Abhishek Koladiya, Yu-Chen Lo, Garry P. Nolan and Kara L. Davis

Bioinformatics Advances, 2023

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Single-cell technologies uncover intra-tumor heterogeneity in childhood cancers

Yu‐Chen Lo, Yuxuan Liu, Marte Kammersgaard, Abhishek Koladiya, Timothy J. Keyes, Kara L. Davis

Seminars in Immunopathology, 2023

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CytofIn enables integrated analysis of public mass cytometry datasets using generalized anchors

Yu-Chen Lo, Timothy J. Keyes, Astraea Jager, Jolanda Sarno, Pablo Domizi, Ravindra Majeti, Kathleen M. Sakamoto, Norman Lacayo, Charles G. Mullighan, Jeffrey Waters, Bita Sahaf, Sean C. Bendall & Kara L. Davis

Nature Communications, 2022

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Leukemia Stem Cells

Methods and Protocols, 2021

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Progressive B Cell Loss in Revertant X-SCID

Connie H. Lin1, Hye Sun Kuehn, Timothy J. Thauland1, Christine M. Lee, Suk See De Ravin, Harry L. Malech, Timothy J. Keyes, Astraea Jager, Kara L. Davis, Maria I. Garcia-Lloret, Sergio D. Rosenzweig, Manish J. Butte

Journal of Clinical Immunology, 2020

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A Cancer Biologist’s Primer on Machine Learning Applications in High-Dimensional Cytometry

Timothy J. Keyes, Pablo Domizi, Yu-Chen Lo, Garry P. Nolan, Kara L. Davis

Cytometry A, 2020

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High-efficiency CRISPR induction of t(9;11) chromosomal translocations and acute leukemias in human blood stem cells

Johan Jeong, Astraea Jager, Pablo Domizi, Mara Pavel-Dinu, Linda Gojenola, Masayuki Iwasaki, Michael C. Wei, Feng Pan, James L. Zehnder, Matthew H. Porteus, Kara L. Davis, and Michael L. Cleary

Blood Advances, 2019

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